Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGM5
Confidence99.67%DateThu Jan 5 11:29:31 GMT 2012
Rank37Aligned Residues113
% Identity15%Templatec1ihgA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:cyclophilin 40; PDBTitle: bovine cyclophilin 40, monoclinic form
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170..... ....180.........190.........200.........210......
Predicted Secondary structure 


................









Query SS confidence 






















. . . . . . . . . . . . . . . .








































Query Sequence  DVWLKGNISPSAELFYEDLDEAD. . . . . . . . . . . . . . . . NIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPY
Query Conservation               
      
  ................            
           

     

   
    
Alig confidence 






















................








































Template Conservation   

  

   
  

  
 


  
                        


     
     

     

   
   
Template Sequence  IGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTK
Template Known Secondary structure  TT
S
GGGTT
TT
TT
Template Predicted Secondary structure 
















Template SS confidence 















































































   229230.........240.........250.........260.........270.........280.........290.........300........
 
   217..220.........230.........240.........250.........260.....
Predicted Secondary structure 








Query SS confidence 
















































Query Sequence  EIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKH
Query Conservation       
  
  

    
      

 
 
    
   
          
Alig confidence 
















































Template Conservation 
    
 

  
  

 
      

 
 
 
  
   
      
   
Template Sequence  ALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ
Template Known Secondary structure  TT

TT
Template Predicted Secondary structure 






Template SS confidence 
















































   309310.........320.........330.........340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions