Job Description P0AFS1 Confidence 2.70% Date Thu Jan 5 11:27:07 GMT 2012 Rank 26 Aligned Residues 181 % Identity 10% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		Y	G	W	E	L	A	L	A	A	L	L	V	I	E	I	V	A	F	G	A	I	N	P	R	M	L	D	L	N	M	L	L	F	S	T	S	D	F	I	C	I	G	I	V	A	L	P	L	T	M	V	I	.	.	.	.	V	S	G	G	I	D	I	S	F	G	S	T	I	G	L	C	A	I	A	L	G	V	L	F
Query Conservation																																																						.	.	.	.
Alig confidence																																																						.	.	.	.
Template Conservation
Template Sequence		H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A
Template Known Secondary structure		G	G																					G	G	G	S	S	S	S																														S	S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		Q	S	G	V	P	M	P	L	A	I	L	L	T	L	L	L	G	A	L	C	G	L	I	N	A	G	L	I	I	Y	T	K	V	N	P	L	V	I	T	L	G	T	L	Y	L	F	A	G	S	A	L	L	L	S	G	M	A	G	A	T	G	Y	E	G	I	G	G	F	P	M	A	F	T	D	F	A	N	L	.	D
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	X	G	H	Q	L	L	V	Q
Template Known Secondary structure		T	T	T	S																													S			G	G	G																				T	S	G	G	G	T						T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	L	P	V	P	L	I	I	F	L	I	C	L	L	V	F	W	L	W	L	H	K	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L	T	V
Template Known Secondary structure																											T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions