|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | G | I | V | G | L | G | S | M | G | M | G | A | A | L | S | Y | V | R | A | G | L | S | . |
. |
T | W | G | A | D | L | N | S | N | A | C | A | T | L | K | E | A | G | . |
. |
A | C | G | V | S | D | N | A | A | T | F | A | E | K | L | D | A | L | L | V | L | V | V | N | A | A | Q | V | K | Q | V | L | F | G |
Query Conservation |   |
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
| . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
N | V | L | I | V | G | V | G | F | X | G | G | S | F | A | K | S | L | R | R | S | G | F | K | G | K | I | Y | G | Y | D | I | N | P | E | S | I | S | K | A | V | D | L | G | I | I | D | E | G | T | T | S | I | A | K | V | E | D | F | S | P | D | F | V | X | L | S | S | P | . |
. |
. |
. |
V | R | T | F | R | E | I |
Template Known Secondary structure |   |
 |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  | S |
| G | G | G | G | G | G | T |
|
| S |  |  |  |  |
| S |
| . | . | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | |
|
|
. | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | G | V | A | Q | H | L | K | P | G | T | A | V | M | V | S | S | T | I | A | S | A | D | A | Q | E | I | A | T | A | L | A | G | F | D | L | E | M | L | D | A | P | V | S | G | G | A | V | K | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | E | M | T | V | M | A | . |
. |
. |
S | G | S | D | I | A | F | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   | . | . | . |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
A | K | K | L | S | Y | I | L | S | E | D | A | T | V | T | D | Q | G | S | V | K | G | K | L | V | Y | D | L | E | N | I | L | G | K | . |
. |
. |
R | F | V | G | G | H | P | I | A | G | T | E | K | S | G | V | E | Y | S | L | D | N | L | Y | E | G | K | K | V | I | L | T | P | T | K | K | T | D | K | K | R | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |
|
| S |
|
| T |  |  |  |  |  |  |  |  |  |  | G | G | . | . | . | G |  |  |
|  |  |  |  |
|
|
| S |
|
| S | G | G | G |
|
| S | S | T | T | T | T |
|  |  |  |  |
|
|
| S | S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | A | P | V | L | E | A | V | A | G | K | V | Y | R |
Query Conservation |   |
  |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
L | V | K | R | V | W | E | D | V | G | G | V | V | E | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |