 |
Job Description | Q46888 | Confidence | 99.06% | Date | Thu Jan 5 12:35:30 GMT 2012 |
Rank | 112 | Aligned Residues | 103 |
% Identity | 16% | Template | d1uxja1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 1.75 |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | H | V | G | I | V | G | L | G | S | M | G | M | G | A | A | L | S | Y | V | R | A | G | L | . |
S | T | W | G | A | D | L | N | S | N | A | C | A | T | L | K | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | A | C | G | V | S | D | N | A | A | T | F | A | E | K | L | D | A | L | L | V | L | V | V | N |
Query Conservation |   |
  |
|
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
| . |   |   |   |
|
|
|
|
|   |   |   |   |   |
Template Sequence |   |
R | K | K | I | S | I | I | G | A | G | F | V | G | S | T | T | A | H | W | L | A | A | K | E | L | G | D | I | V | L | L | D | I | V | E | G | V | P | Q | G | K | A | L | D | L | Y | E | A | S | P | I | E | G | F | D | V | R | V | T | G | T | N | N | Y | A | D | . |
T | A | N | S | D | V | I | V | V | T | S | G | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T |
|
|
|
|  |  |  |  | S |
| G | G | G | . | G | T | T |
| S |  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
|
|
|
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
A | A | Q | V | K | Q | V | L | F | G | E | T | G | V | A | Q | H | L | K | P | G | T | A | V | M | V | S | S | T | I | A | S | A | D | A | Q |
Query Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |
Template Sequence |   |
P | L | I | K | V | N | A | D | I | T | R | A | C | I | S | Q | A | A | P | L | S | P | N | A | V | I | I | M | V | N | N | P | L | D | A | M | T | Y | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| T | T |
|  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|