Job Description Q46888 Confidence 97.76% Date Thu Jan 5 12:35:30 GMT 2012 Rank 326 Aligned Residues 96 % Identity 10% Template c7mdhA_ PDB info PDB header:chloroplastic malate dehydrogenase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form Resolution 2.40 Å

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		7	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure										.																	.	.	.	.	.	.	.								.	.													.	.	.	.	.	.	.	.	.
Query SS confidence										.																	.	.	.	.	.	.	.								.	.													.	.	.	.	.	.	.	.	.
Query Sequence		F	H	V	G	I	V	G	L	.	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	.	.	.	.	.	S	T	W	G	A	D	L	.	.	N	S	N	A	C	A	T	L	K	E	A	G	.	.	.	.	.	.	.	.	.	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L
Query Conservation										.																	.	.	.	.	.	.	.								.	.													.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.	.	.	.	.	.								.	.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	I	A	V	S	G	A	A	G	M	I	S	N	H	L	L	F	K	L	A	S	G	E	V	F	G	Q	D	Q	P	I	A	L	K	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	A	M	E	L	E	D	S	L	Y	P	L	L	R	E	V	S	I	G	I	D	P	Y	E	V	F	E	D	V	D	W	A
Template Known Secondary structure								T	T	T	S													T	T	T	T		T	T											G	G	G													T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		68	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	L	V	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	I	G	A	K	P	R	G	P	G	M	E	R	A	A	L	L	D	I	N	G	Q	I	F	A	D	Q	G	K	A	L	N	A	V	A	S	K	N	V	K	V	L	V	V	G	N
Template Known Secondary structure											T	T																									S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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