Job Description Q46888 Confidence 97.99% Date Thu Jan 5 12:35:30 GMT 2012 Rank 300 Aligned Residues 99 % Identity 15% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.			.	.	40	.	.	.					.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure													.																	.	.	.	.	.	.	.								.	.							.	.	.	.							.	.	.	.	.
Query SS confidence													.																	.	.	.	.	.	.	.								.	.							.	.	.	.							.	.	.	.	.
Query Sequence		G	S	E	F	H	V	G	I	V	G	L	.	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	.	.	.	.	.	S	T	W	G	A	D	L	.	.	N	S	N	A	C	A	.	.	.	.	T	L	K	E	A	G	.	.	.	.	.	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L
Query Conservation													.																	.	.	.	.	.	.	.								.	.							.	.	.	.							.	.	.	.	.
Alig confidence													.																	.	.	.	.	.	.	.								.	.							.	.	.	.							.	.	.	.	.
Template Conservation
Template Sequence		S	E	P	I	R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	D	V	I	A	T	D	K	E	E	I	A	F	K	D	L
Template Known Secondary structure											S	T	T	S	T											T	T	T	T	T		T	T											G	G	G														T			T	T								S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	L	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N
Template Known Secondary structure		S							S					S	S	S		S		T	T																			S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions