Job Description Q46888 Confidence 98.39% Date Thu Jan 5 12:35:30 GMT 2012 Rank 247 Aligned Residues 118 % Identity 13% Template c3nepX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:malate dehydrogenase; PDBTitle: 1.55a resolution structure of malate dehydrogenase from salinibacter2 ruber Resolution 1.55 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	.	.	.	.	.	.	.	.	.	.	.	A	G	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L	L	V	L	V	V	N
Query Conservation																										.	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																		.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																																			.
Template Sequence		M	K	V	T	V	I	G	A	G	N	V	G	A	T	V	A	E	C	V	A	R	Q	D	V	A	K	E	V	V	M	V	D	I	K	D	G	M	P	Q	G	K	A	L	D	M	R	E	S	S	P	I	H	G	F	D	T	R	V	T	G	T	N	D	Y	G	.	P	T	E	D	S	D	V	C	I	I	T	A	G	L
Template Known Secondary structure										S														T		S	S							S	S	T	T																	T									S	S	S	G	.	G	G	T	T		S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100
		74	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		A	A	Q	V	.	.	.	.	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		R	D	D	L	L	A	K	N	T	E	I	V	G	G	V	T	E	Q	F	V	E	G	S	P	D	S	T	I	I	V	V	A	N	P	L	D	V	M	T	Y	V	A	Y	E	A	S	G	F	P	T	N	R	V	M	G	M
Template Known Secondary structure																						T	T		T	T								S	S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions