Job Description Q46888 Confidence 99.95% Date Thu Jan 5 12:35:30 GMT 2012 Rank 35 Aligned Residues 276 % Identity 16% Template c3k96B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L	L	V	L	V
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	H	P	I	A	I	L	G	A	G	S	W	G	T	A	L	A	L	V	L	A	R	K	G	Q	K	V	R	L	W	S	Y	E	S	D	H	V	D	E	M	Q	A	E	G	V	N	N	R	Y	L	P	N	Y	P	F	P	E	T	L	K	A	Y	C	D	L	K	A	S	L	E	G	V	T	D	I	L	I	V	V
Template Known Secondary structure				S								S												T	T	T								S												S	S	B	T	T	T	B	T	T					T	T					S							T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	.	.	.	.	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	M	A	S	G	S	D
Query Conservation																																					.	.	.	.
Alig confidence			.	.	.	.																															.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		P	.	.	.	.	S	F	A	F	H	E	V	I	T	R	M	K	P	L	I	D	A	K	T	R	I	A	W	G	T	K	G	L	A	K	G	S	R	L	L	H	E	V	V	A	T	E	L	G	Q	V	P	M	A	V	I	S	G	P	S	L	A	T	E	V	A	A	N	L	P	T	A	V	S	L	A	S	N	N	S
Template Known Secondary structure			.	.	.	.												T	T	T			T	T									S			T	T	T													S								S	S								T	T										S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		84					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	F	E	R	L	A	P	V	L	E	A	V	A	G	K	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	A	M	A	L	A	A	R	A	G	I	P	L	D	V	M	Y
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		Q	F	S	K	D	L	I	E	R	L	H	G	Q	R	F	R	V	Y	K	N	D	.	D	M	I	G	V	E	L	C	G	S	V	K	N	I	L	A	I	A	T	G	I	S	D	G	L	K	L	G	S	N	A	R	A	A	L	I	T	R	G	L	T	E	M	G	R	L	V	S	V	F	G	G	K	Q	E	T	L	T
Template Known Secondary structure														S	S							S	.																									T	T																									T							T
Template Predicted Secondary structure																							.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.												.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	T	N	A	A	G	N	S	W	M	F	E	N	R	M	R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	.	.	.	.	.	.	.	.	.	.	.	V	K	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M	F	T	S	A	S	N	A	G
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		G	L	A	G	L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	L	A	L	G	E	G	V	D	K	K	E	A	Q	Q	A	I	G	Q	A	I	E	G	L	Y	N	T	D	Q	V	H	A	L	A	Q	K	H	A	I	E	M	P	L	T	F	Q	V	H	R	I	L	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T	T											T	T												T	T												S																		T	T														.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	E	D	D	S	A	V	I	K	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	D	L	D	P	Q	Q	A	V	Q	E	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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