Job Description Q46888 Confidence 99.72% Date Thu Jan 5 12:35:30 GMT 2012 Rank 89 Aligned Residues 251 % Identity 15% Template c3i83B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from methylococcus2 capsulatus Resolution 1.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	.	.	.	.	.	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F
Query Conservation																																												.	.	.	.	.
Alig confidence																																		.	.									.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		N	I	L	V	I	G	T	G	A	I	G	S	F	Y	G	A	L	L	A	K	T	G	H	C	V	S	V	V	S	R	S	D	.	.	Y	E	T	V	K	A	K	G	I	R	I	R	S	A	T	L	G	D	Y	T	F	R	P	A	A	V	V	R	D	C	T	L	L	C	D	R	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S		S														T								S	T	T	.	.							T							S	S	S								S														.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	.	.	M	A	S	G	S	D	I	A	F	E	R	L	A	P	V	L	E	A	V
Query Conservation																																																													.	.
Alig confidence		.	.																																																										.	.
Template Conservation		.	.
Template Sequence		.	.	G	L	L	R	D	A	V	A	G	I	V	L	I	S	N	G	I	D	I	E	P	E	V	A	A	A	F	P	E	V	I	S	G	L	A	F	I	G	V	T	R	T	A	P	G	E	I	W	H	Q	A	Y	G	R	L	M	L	G	N	Y	P	G	G	V	S	E	R	V	K	T	L	A	A	A	F	E	E	A
Template Known Secondary structure		.	.			T	T	T										S	S	S	S		S																								T	T															S	S	S																T
Template Predicted Secondary structure		.	.
Template SS confidence
				87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																					.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		A	G	K	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	A	M	A	L	A	A	R	A	G	I	.	.	P	L	D	V	M	Y	D	V	V	T	N	A	A	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence						.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation						.
Template Sequence		G	I	D	G	.	I	A	T	E	N	I	T	T	A	R	W	Q	K	C	V	W	N	A	A	F	N	P	L	S	V	L	S	G	G	L	D	T	L	D	I	L	S	T	Q	E	G	F	V	R	A	I	M	Q	E	I	R	A	V	A	A	A	N	G	H	P	L	P	E	D	I	V	E	K	N	V	A	S	T	Y	K
Template Known Secondary structure		T	S			.				S																							T	T	S																												T	T					T	T
Template Predicted Secondary structure						.
Template SS confidence
		170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	W	M	F	E	N	R	M	R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	V	K	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M	F	T	S	A	S	N	A
Query Conservation
Alig confidence																									.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		M	P	P	Y	K	T	S	M	L	V	D	F	E	A	G	Q	P	M	E	T	E	V	I	.	.	.	.	.	.	L	G	N	A	V	R	A	G	R	R	T	R	V	A	I	P	H	L	E	S	V	Y	A	L	M	K	L	L	E	L	R
Template Known Secondary structure		S		S												T				S					.	.	.	.	.	.											T	T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions