Job Description Q46888 Confidence 97.87% Date Thu Jan 5 12:35:30 GMT 2012 Rank 311 Aligned Residues 120 % Identity 23% Template c3do5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.										.	30	.	.	.		.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.						.						.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.						.						.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	.	.	.	.	.	.	.	.	.	G	L	S	T	W	.	G	A	D	L	N	.	.	.	.	.	.	.	.	.	S	N	A	C	A	T	L	K	E	A	G	A	C	G	V	S	D	N	A	A	T	F	A	E	.	.	K	L
Query Conservation																									.	.	.	.	.	.	.	.	.						.						.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																									.	.	.	.	.	.	.	.	.						.						.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		X	I	K	I	A	I	V	G	F	G	T	V	G	Q	G	V	A	E	L	L	I	R	K	R	E	E	I	E	K	A	I	G	E	F	K	V	T	A	V	A	D	S	K	S	S	I	S	G	D	F	S	L	V	E	A	L	R	X	K	R	E	T	G	X	L	R	D	D	A	K	A	I	E	V	V	R	S	A	D	Y
Template Known Secondary structure											S													T																			S	S					S	S														S	S		S	B											S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																								.																						.
Query SS confidence																																								.																						.
Query Sequence		D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	.	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	.	D	A	P	V	S	G	G	A	V
Query Conservation																																								.																						.
Alig confidence												.	.	.	.	.	.	.																						.																						.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		D	V	L	I	E	A	S	V	T	R	.	.	.	.	.	.	.	E	G	V	N	Y	I	R	E	A	L	K	R	G	K	H	V	V	T	S	N	K	G	P	L	V	A	E	F	H	G	L	X	S	L	A	E	R	N	G	V	R	L	X	Y	E	A	T	V	G	G	A	X	P
Template Known Secondary structure		S										.	.	.	.	.	.	.											T	T	T								S																	T	T						G	G	G	S	S	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions