Job Description Q46888 Confidence 100.00% Date Thu Jan 5 12:35:30 GMT 2012 Rank 5 Aligned Residues 291 % Identity 31% Template c3ckyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		S	I	K	I	G	F	I	G	L	G	A	M	G	K	P	M	A	I	N	L	L	K	E	G	V	T	V	Y	A	F	D	L	M	E	A	N	V	A	A	V	V	A	Q	G	.	A	Q	A	C	E	N	N	Q	K	V	A	A	A	S	D	I	I	F	T	S	L	P	N	A	G	I	V	E	T	V	M	N	G	P	G
Template Known Secondary structure												T	T											T	T								S	S									T	T	T	.					S	S									S							S	S										S	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	M	A	S	G	S	D	I	A	F	E	R	L	A	P	V	L	E	A	V	A	G	K	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	L	S	A	C	K	A	G	T	V	I	V	D	M	S	S	V	S	P	S	S	T	L	K	M	A	K	V	A	A	E	K	G	I	D	Y	V	D	A	P	V	S	G	G	T	K	G	A	E	A	G	T	L	T	I	M	V	G	A	S	E	A	V	F	E	K	I	Q	P	V	L	S	V	I	G	K	D	I	Y
Template Known Secondary structure							S		T	T																								T	T										S								T								S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	G	A	E	A	M	A	L	A	A	R	A	G	I	P	L	D	V	M	Y	D	V	V	T	N	A	A	G	N	S	W	M	F	E	N	R	M	R	H	V	V	D	G	D	Y	T	.	P	H	S	A	V	D	I	F
Query Conservation																																																																									.
Alig confidence					.																																																																				.
Template Conservation					.
Template Sequence		H	V	G	.	D	T	G	A	G	D	A	V	K	I	V	N	N	L	L	L	G	C	N	M	A	S	L	A	E	A	L	V	L	G	V	K	C	G	L	K	P	E	T	M	Q	E	I	I	G	K	S	S	G	R	S	Y	A	M	E	A	K	M	E	K	F	I	M	S	G	D	F	A	G	G	F	A	M	D	L	Q
Template Known Secondary structure					.	S	T	T																														T	T												T	S	T	T															T				S	S	S	S	B
Template Predicted Secondary structure					.
Template SS confidence
		163	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M	F	T	S	A	S	N	A	G	Y	G	K	E	D	D	S	A	V	I	K	I	F	S	G	I	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	D	L	G	L	A	L	E	A	G	K	E	G	N	V	P	L	P	M	T	A	M	A	T	Q	I	F	E	G	G	R	A	M	G	L	G	R	E	D	M	S	A	V	I	K	V	W	E	Q	M	T	G	V
Template Known Secondary structure																T																			T	T		T	T	S	B	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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