Job Description Q46888 Confidence 100.00% Date Thu Jan 5 12:35:30 GMT 2012 Rank 14 Aligned Residues 262 % Identity 21% Template c2p4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae Resolution 2.37 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.															.	.	.
Query SS confidence																																																	.	.	.	.															.	.	.
Query Sequence		S	E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	A	C	.	.	.	.	G	V	S	D	N	A	A	T	F	A	E	K	L	D	.	.	.	A	L	L	V	L	V	V	N	A	A	Q	V
Query Conservation																																																	.	.	.	.															.	.	.
Alig confidence																																																	.	.	.	.															.	.	.
Template Conservation
Template Sequence		M	S	A	D	F	G	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	A	A	D	H	G	F	T	V	C	A	Y	N	R	T	Q	S	K	V	D	H	F	L	A	N	E	A	K	G	K	S	I	I	G	A	T	S	I	E	D	F	I	S	K	L	K	R	P	R	K	V	M	L	L	V	K	A	G	A	P	V
Template Known Secondary structure					S							S													T	T								S	S	S									T	T	T	T	T	S	S					S	S							T	S		S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	M	A	S	G	S	D	I	A	F	E	R	L	A	P	V	L
Query Conservation
Alig confidence						.	.	.																																																						.
Template Conservation						.	.	.																																																						.
Template Sequence		D	A	L	I	.	.	.	N	Q	I	V	P	L	L	E	K	G	D	I	I	I	D	G	G	N	S	H	F	P	D	S	N	R	R	Y	E	E	L	K	K	K	G	I	L	F	V	G	S	G	V	S	G	G	E	E	G	A	R	Y	G	.	P	S	L	M	P	G	G	S	E	E	A	W	P	H	I	K	N	I	F
Template Known Secondary structure						.	.	.				G	G	G			T	T							S																	T	T										S									.									G	G	G
Template Predicted Secondary structure						.	.	.																																																						.
Template SS confidence
		81	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		158	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																							.												.	.	.
Query SS confidence								.	.	.	.	.	.																																							.												.	.	.
Query Sequence		E	A	V	A	G	K	.	.	.	.	.	.	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	G	A	E	A	M	A	L	A	A	R	.	A	G	I	P	L	D	V	M	Y	D	V	.	.	.	V	T	N	A	A	G	N	S	W	M	F	E	N	R	M
Query Conservation								.	.	.	.	.	.																																							.												.	.	.
Alig confidence								.	.	.	.	.	.						.																																	.												.	.	.
Template Conservation																			.
Template Sequence		Q	S	I	S	A	K	S	D	G	E	P	C	C	E	W	V	G	.	P	A	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	D	I	M	K	R	L	G	G	F	T	D	K	E	I	S	D	V	F	A	K	W	N	N	G	V	L	D	S	F	L	V	E	I	T	R
Template Known Secondary structure					S				T	T			S						.		T	T																														T	T																T	T	T	T		B
Template Predicted Secondary structure																			.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	V	K	D	L	G	.	.	.	.	.	.	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	L	K	F	D	D	V	D	G	K	P	L	V	E	K	I	M	D	T	A	G	Q	K	G	T	G	K	W	T	A	I	N	A	L	D	L	G	M	P	V	T	L	I	G	E	A	V	F	A
Template Known Secondary structure					T		B		T	T	S	S	B	G	G	G	G	S								S													T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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