Job Description Q46888 Confidence 100.00% Date Thu Jan 5 12:35:30 GMT 2012 Rank 27 Aligned Residues 259 % Identity 17% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	C	G	V	S	D	N	A	A	T	F	A	E	K
Query Conservation																													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	V	S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E
Template Known Secondary structure					S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.												.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		L	D	A	L	L	V	L	V	V	N	A	.	.	.	.	.	.	.	.	.	.	.	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	.	.	.	L	E	M	L	D	A	P	V	S	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		A	D	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P	E	F	L
Template Known Secondary structure			S										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure												.	.	.	.									.	.	.	.
Query SS confidence												.	.	.	.									.	.	.	.
Query Sequence		G	A	V	K	A	A	N	G	E	M	.	.	.	.	T	V	M	A	S	G	S	D	.	.	.	.	I	A	F	E	R	L	A	P	V	L	E	A	V	A	G	K	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	G	A	E	A	M	A	L	A	A	R
Query Conservation												.	.	.	.									.	.	.	.
Alig confidence												.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I	S	A	V	C	E	A
Template Known Secondary structure			T	T								S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		A	G	I	P	L	D	V	M	Y	D	V	V	T	N	A	A	G	N	S	W	M	F	E	N	R	M	R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	V	K	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	.	.	L	P	L	A	S	T	A	L	N	M
Query Conservation																																																														.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		T	G	A	E	I	S	E	V	A	H	A	V	G	Y	D	T	R	I	G	S	K	F	L	.	.	.	.	.	.	.	.	.	Q	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	S	L	V	Y	L	C	E	S	L	N	L	P	Q	V	A	D	Y	W	Q	G	V	I	N	I
Template Known Secondary structure			T												T	S	T	T	T		S	T	T		.	.	.	.	.	.	.	.	.				S				S	S	S															T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions