Job Description Q46888 Confidence 98.74% Date Thu Jan 5 12:35:30 GMT 2012 Rank 188 Aligned Residues 123 % Identity 15% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.			.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.										.	.							.																			.	.	.												.	.
Query SS confidence																				.	.	.	.										.	.							.																			.	.	.												.	.
Query Sequence		M	K	T	G	S	E	F	H	V	G	I	V	G	L	G	S	M	G	.	.	.	.	M	G	A	A	L	S	Y	V	R	.	.	A	G	L	S	T	W	.	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	A	C	.	.	.	G	V	S	D	N	A	A	T	F	A	E	.	.	K	L	D	A	L	L
Query Conservation																				.	.	.	.										.	.							.																			.	.	.												.	.
Alig confidence																				.	.	.	.										.	.							.																			.	.	.												.	.
Template Conservation
Template Sequence		L	A	S	S	R	P	I	R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	L	E	S	F	A	Q	Y	K	D	I	D	M	I	V
Template Known Secondary structure						S								S			S	T	T	S					T								T	T	T	T									S	S											T	T		T	T					S									T	T		S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	.	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		V	S	V	K	V	P	E	H	Y	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T
Template Known Secondary structure				S															T	T	T	T		S	S								S	S	S	S	S	S													T		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions