Job Description Q46888 Confidence 99.96% Date Thu Jan 5 12:35:30 GMT 2012 Rank 34 Aligned Residues 263 % Identity 14% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	C	G	V	S	D	N	A	A	T	F	A	E	K
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	I	V	G	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	R	V	K	L	Y	D	I	E	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S	L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	N	L	A	E	A	V	E	G
Template Known Secondary structure									S													T	T								S																						T	T				S	S	S								T					S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	M	A
Query Conservation
Alig confidence																							.	.																							.	.	.
Template Conservation																							.	.																							.	.	.
Template Sequence		V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	.	.	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	S	K	.	.	.	L	F	T	G	L	A	H	V	K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	I	P	L	V	E	L	V	P	H	P
Template Known Secondary structure			S								S												.	.			T	T			S	S								S	S						.	.	.			T	T		T	T	G	G	G								S	S	T	T	T										T
Template Predicted Secondary structure																							.	.																							.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	D	I	A	F	E	R	L	A	P	V	L	E	A	V	A	G	K	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	G	A	E	A	M	A	L	A	A	R	A	G	I	P	L	D	V	M	Y	D	V	V	T	N	A	A	G	N	S	W	M	F
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		E	T	S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q	S	P	V	R	V	L	K	E	I	D	G	F	V	L	N	R	L	.	.	.	.	.	.	.	.	Q	Y	A	I	I	S	E	A	W	R	L	V	E	E	G	I	V	S	P	S	D	L	D	L	V	M	S	D	G	L	G	M	R	Y	A	F
Template Known Secondary structure		T																T	T							S	S			T	T	T	T					.	.	.	.	.	.	.	.														T	T	S	S											T	T						T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	R	M	R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	V	K	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M	F	T	S	A	S	N	A	G	Y	G	K	E	D	D	S
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		I	G	P	L	E	T	M	.	.	.	H	L	N	A	E	G	M	L	S	Y	S	D	R	Y	S	E	G	M	K	R	V	L	K	S	F	G	S	I	P	E	F	S	G	A	T	V	E	K	V	N	Q	A	M	C	K	K	V	P	A	D	P	E	H
Template Known Secondary structure		S							.	.	.			T	T	T	S																		T																							S		S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		235	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions