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Job Description | Q46888 | Confidence | 98.39% | Date | Thu Jan 5 12:35:30 GMT 2012 |
Rank | 245 | Aligned Residues | 95 |
% Identity | 19% | Template | c2e37B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: structure of tt0471 protein from thermus thermophilus
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Resolution | 2.30 Å |
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Query Sequence |   |
F | H | V | G | I | V | G | L | G | S | M | G | M | G | A | A | L | S | Y | V | R | A | G | . |
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A | G | A | C | G | V | S | D | N | A | A | T | F | A | E | K | L | D | A | L | L | V | L | V | V | N | A | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
X | K | V | G | I | V | G | S | G | X | V | G | S | A | T | A | Y | A | L | A | L | L | G | V | A | R | E | V | V | L | V | D | L | D | R | K | L | A | Q | A | H | A | E | D | I | L | H | A | T | P | F | A | H | P | V | W | V | R | A | G | S | Y | G | D | L | E | G | A | R | A | V | V | L | A | A | G | V | A | R | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
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75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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A | Q | V | K | Q | V | L | F | G | E | T | G | V | A | Q | H | L | K | P | G | T | A | V | M | V | S | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | L | L | D | R | N | A | Q | V | F | A | Q | V | V | P | R | V | L | E | A | A | P | E | A | V | L | L | V | A | T | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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