Job Description Q46888 Confidence 97.79% Date Thu Jan 5 12:35:30 GMT 2012 Rank 321 Aligned Residues 93 % Identity 17% Template c2czcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 pyrococcus horikoshii ot3 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.																					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	.	L	S	T	W	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	N	A	C	A	T	L	K	E	A	G	A	C	G	V	S	D	N	A	A	T	F	A	E	K	L
Query Conservation																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																			.
Template Sequence		K	V	K	V	G	V	N	G	Y	G	T	I	G	K	R	V	A	Y	A	V	T	K	Q	D	D	M	E	L	I	G	I	T	K	T	K	P	D	F	E	A	Y	R	A	K	E	L	G	I	P	V	Y	A	A	S	E	E	F	I	P	R	F	E	K	E	G	.	F	E	V	A	G	T	L	N	D	L	L	E	K	V
Template Known Secondary structure											S												T		S	S									S	S											T	T						S	S	G	G	G							T	T	.				S		B						T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		D	I	I	V	D	A	T	P	G	G	.	.	.	.	.	.	.	I	G	A	K	N	K	P	L	Y	E	K	A	G	V	K	A	I	F	Q	G	G	E	K	A	D
Template Known Secondary structure		S							S	T	T	.	.	.	.	.	.	.												T	T							T	T	S		G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions