Job Description Q46888 Confidence 99.89% Date Thu Jan 5 12:35:30 GMT 2012 Rank 55 Aligned Residues 256 % Identity 15% Template c1z82A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	S	T	W	G	A	D	L	N	S	N	A	C	A	T	L	K	E	A	G	A	C	G	.	.	.	.	.	.	.	.	.	V	S	D	N	A	A	T	F	A	E	K	L	D	A	L	L	V	L	V	V	N	A	A	Q	V	K
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	F	F	V	L	G	A	G	S	W	G	T	V	F	A	Q	X	L	H	E	N	G	E	E	V	I	L	W	A	R	R	K	E	I	V	D	L	I	N	V	S	H	T	S	P	Y	V	E	E	S	K	I	T	V	R	A	T	N	D	L	E	E	I	K	K	E	D	I	L	V	I	A	I	P	V	Q	.	.	.	.
Template Known Secondary structure									S													T	T								S	S											S		B	T	T	B	T	T					S				S		G	G	G			T	T							S		G	G	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	.	.	.	.	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M	T	V	M	A	S	G	S	D	I	A	F	E	R	L	A
Query Conservation																											.	.	.	.
Alig confidence		.	.	.																							.	.	.	.																																													.	.	.
Template Conservation		.	.	.																																																																							.	.	.
Template Sequence		.	.	.	Y	I	R	E	H	L	L	R	L	P	V	K	P	S	X	V	L	N	L	S	K	G	I	E	I	K	T	G	K	R	V	S	E	I	V	E	E	I	L	G	C	P	Y	A	V	L	S	G	P	S	H	A	E	E	V	A	K	K	L	P	T	A	V	T	L	A	G	E	N	S	.	.	.	K	E	L	Q
Template Known Secondary structure		.	.	.	G						T	T		S	S			S											T	T	T												T									S	S								T	T										T	T		.	.	.
Template Predicted Secondary structure		.	.	.																																																																							.	.	.
Template SS confidence
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.																	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	L	E	A	V	A	G	K	V	Y	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	G	A	E	A	M	A	L	A	A	R	A	G	I	P	L	D	V	M	Y	D	V	V	T	N	A	A	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	S	T	E	Y	F	R	V	Y	T	C	E	D	V	V	G	V	E	I	A	G	A	L	K	N	V	I	A	I	A	A	G	I	L	D	G	F	G	G	W	D	N	A	K	A	A	L	E	T	R	G	I	Y	E	I	A	R	F	G	X	F	F	G	A	D	Q	K	T	F	X	G	L	A	G	I	G	D	L
Template Known Secondary structure							S	S							S																									T	T																								T	T							T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	W	M	F	E	N	R	M	R	H	V	V	D	G	D	Y	T	P	H	S	A	V	D	I	F	V	K	.	.	.	.	.	.	.	.	.	.	.	D	L	G	L	V	A	D	T	A	K	A	L	H	F	P	L	P	L	A	S	T	A	L	N	M	F	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	V	T	C	N	S	R	Y	S	R	N	R	R	F	G	E	L	I	A	R	G	F	N	P	L	K	L	L	E	S	S	N	Q	V	V	E	G	A	F	T	V	K	A	V	X	K	I	A	K	E	N	K	I	D	X	P	I	S	E	E	V	Y	R	V	V	Y
Template Known Secondary structure								T	T													T									T		S	S			T															T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions