Return to main results Retrieve Phyre Job Id

Job DescriptionQ46888
Confidence97.20%DateThu Jan 5 12:35:30 GMT 2012
Rank414Aligned Residues67
% Identity10%Templatec1nytC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50 .........60.........70....
Predicted Secondary structure 










....














Query SS confidence 










































. . . .























Query Sequence  HVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGA. . . . CGVSDNAATFAEKLDALLVLVVNA
Query Conservation 

 


 
 

  

  
   
  
   
        
   
 ....     
  
     
     
   
Alig confidence 










































....























Template Conservation   


 








   
   
  
 
 

   

  

                      







 
Template Sequence  RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG
Template Known Secondary structure 

STT

SSTTTTS

TGGGTT


S
SS
G
Template Predicted Secondary structure 

























Template SS confidence 






































































   121........130.........140.........150.........160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions