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Job DescriptionQ46888
Confidence100.00%DateThu Jan 5 12:35:30 GMT 2012
Rank21Aligned Residues262
% Identity15%Templatec1mv8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40...... ...50.........60.......
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Query Sequence  FHVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLK. . . . . . . . . . . . . . . . . . . EAGACGVSDNAATFAEKLDAL
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Template Sequence  MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS
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STTTT

S
TT

SS

TTTT
S
T
S
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   68.70.... .....80.........90.........100.........110.........120.. .......130.....
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Query Sequence  LVLVVNA. . . . . . . . . AQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEM. . . LDAPVSGGAVKAA
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Template Sequence  FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLR
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B
TTSSB

TT

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S


TTTS

BTTTB





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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   136...140 .........150.........160.........170.........180.........190.........200......
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Query Sequence  NGEMT. . . . . . . . . VMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPL
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Template Sequence  ESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIRKT. . VEVAEMIKYTCNVWHAAKVTFANEIGNIAKAVGVDG
Template Known Secondary structure  TTSS
S
SSTTSSS
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   161........170.........180.........190.........200.. .......210.........220.........230........
 
   207..210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  DVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASN
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Template Sequence  REVMDVICQDHKLNLSRYYMRPG. . . . . . . FAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSNSNQVQ
Template Known Secondary structure  TT
TTTTTSSTT
S

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SSSTT


TTGGG
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   239240.........250.........260. ........270.........280.........290.........300..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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