Job Description Q46888 Confidence 98.01% Date Thu Jan 5 12:35:30 GMT 2012 Rank 297 Aligned Residues 173 % Identity 17% Template c1ebuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.																	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	S	E	F	H	V	G	I	V	G	L	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	.	.	.	S	T	W	G	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	N	A	C	A	T	L	K	E	A	G	A	C	G	V	S	D	N	A	A	T	F	A
Query Conservation																														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	K	V	V	N	V	A	V	I	G	A	G	V	V	G	S	A	F	L	D	Q	L	L	A	M	K	S	T	I	T	Y	N	L	V	L	L	A	E	A	E	R	S	L	I	S	K	D	F	S	P	L	N	V	G	S	D	W	K	A	A	L	A	A	S	T	T	K	T	L	P	L	D	D	L	I	A	H	L	K
Template Known Secondary structure				S										S												T				S	S										S	S	B					T	T		S			T	T	T	T												B												T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		62	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		E	K	.	.	L	D	A	L	L	V	L	V	V	N	A	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T	I	A	S	A	D	A	Q	E	I	A	T	A	L	A	G	F	D	L	E	M	L	D	A	P	V	S	G	G	A	V	K	A	A	N	G	E	M
Query Conservation				.	.
Alig confidence				.	.																																				.	.	.																																			.	.	.	.
Template Conservation																																									.	.	.																																			.	.	.	.
Template Sequence		T	S	P	K	P	V	I	L	V	D	N	T	S	S	A	Y	I	A	G	F	Y	T	K	F	V	E	N	G	I	S	I	A	T	P	N	K	K	A	F	.	.	.	S	S	D	L	A	T	W	K	A	L	F	S	N	K	P	T	N	G	F	V	Y	H	E	A	T	V	G	A	G	L	P	I	I	S	.	.	.	.
Template Known Secondary structure		T		S	S								S							T	T							T	T									T	T	T	.	.	.	S	S		S							T	S			S	S	S						G	G	G	S	S	T	T	S	T	T			.	.	.	.
Template Predicted Secondary structure																																									.	.	.																																			.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		T	V	M	A	S	G	S	D	I	A	F	E	R	L	A	P	V	L	E	A	V	A	G	K	V	Y	R	I	G	A	E	P	G	L	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	.	.	.	.	.	.	.	.	.	G	A	E	A	M	A	L	A	A	R	A	G	I
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.								.											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.								.											.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	L	R	E	I	I	Q	.	T	G	D	E	V	E	K	I	E	G	.	.	.	.	.	.	.	.	.	I	F	S	G	T	L	S	Y	I	F	N	E	F	S	T	S	Q	A	N	D	V	K	F	S	D	V	V	K	V	A	K	K	L	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								.		T									.	.	.	.	.	.	.	.	.														S		S	S																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								.											.	.	.	.	.	.	.	.	.
Template SS confidence
														155	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions