Job Description Q46888 Confidence 98.02% Date Thu Jan 5 12:35:30 GMT 2012 Rank 294 Aligned Residues 98 % Identity 11% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure												.																	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		S	E	F	H	V	G	I	V	G	L	.	G	S	M	G	M	G	A	A	L	S	Y	V	R	A	G	L	.	.	.	.	.	.	.	S	T	W	G	A	D	L	N	S	N	A	C	A	.	.	.	.	.	.	.	.	T	L	K	E	A	G	.	.	.	.	.	A	C	G	V	S	D	N	A	A	T	F	A	E	K
Query Conservation												.																	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation
Template Sequence		T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D
Template Known Secondary structure										S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		64	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	A	L	L	V	L	V	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	V	K	Q	V	L	F	G	E	T	G	V	A	Q	H	L	K	P	G	T	A	V	M	V	S	S	T
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N
Template Known Secondary structure			S												T	T																									S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions