Job Description P76518 Confidence 100.00% Date Thu Jan 5 12:23:58 GMT 2012 Rank 3 Aligned Residues 365 % Identity 32% Template d1q7ea_ SCOP info CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		K	G	P	F	E	G	L	L	V	I	D	M	T	H	V	L	N	G	P	F	G	T	Q	L	L	C	N	M	G	A	R	V	I	K	V	E	P	P	G	H	G	D	D	T	R	T	F	G	P	Y	V	D	G	.	Q	S	L	Y	Y	S	F	I	N	H	G	K	E	S	V	V	L	D	L	K	N	D	H	D	K	S
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		S	T	P	L	Q	G	I	K	V	L	D	F	T	G	V	Q	S	G	P	S	C	T	Q	X	L	A	W	F	G	A	D	V	I	K	I	E	R	P	G	V	G	D	V	T	R	H	Q	L	R	D	I	P	D	I	D	A	L	Y	F	T	X	L	N	S	N	K	R	S	I	E	L	N	T	K	T	A	E	G	K	E
Template Known Secondary structure				T	T	T	T									T	T												T	T									T	T	T			G	G	G	T	T	T		S	S	T	T	S							T	T		T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	I	N	M	L	K	Q	A	D	V	L	A	E	N	F	R	P	G	T	M	E	K	L	G	F	S	W	E	T	L	Q	E	I	N	P	R	L	I	Y	A	S	S	S	G	F	G	H	T	G	P	L	K	D	A	P	A	Y	D	T	I	I	Q	A	M	S	G	I	M	M	E	T	G	Y	P	D	A	P	P	V
Query Conservation
Alig confidence																					.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		V	X	E	K	L	I	R	E	A	D	I	L	V	E	N	F	H	P	F	.	.	.	.	.	.	.	T	W	E	H	I	Q	E	I	N	P	R	L	I	F	G	S	I	K	G	F	D	E	C	S	P	Y	V	N	V	K	A	Y	E	N	V	A	Q	A	A	G	G	A	A	S	T	T	G	F	W	D	G	P	P	L
Template Known Secondary structure											S										.	.	.	.	.	.	.										T	T								S	S		T	T	S	T	T	T	T	S											T	T					S	S		T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																		.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	G	T	S	L	A	D	L	C	G	G	V	Y	L	F	S	G	I	V	S	A	L	Y	G	R	E	K	S	Q	R	G	A	H	V	D	I	A	M	F	D	A	T	L	S	F	L	E	H	G	L	M	A	Y	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	S	P	Q	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	A	A	A	L	G	D	S	N	T	G	X	H	L	L	I	G	L	L	A	A	L	L	H	R	E	K	T	G	R	G	Q	R	V	T	X	S	X	Q	D	A	V	L	N	L	C	R	V	K	L	R	D	Q	Q	R	L	D	K	L	G	Y	L	E	E	Y	P	Q	Y	P	N	G	T	F	G	D	A	V	P	R
Template Known Secondary structure				S	S		T	T	T																						S																	T														S			T	T	S	T	T	T	T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		229	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		L	G	N	R	H	P	Y	M	A	P	F	.	.	.	.	.	D	V	F	N	T	Q	D	K	P	I	T	I	C	C	G	N	D	K	L	F	S	A	L	C	Q	A	L	E	L	T	E	L	V	N	D	P	R	F	S	S	N	I	L	R	V	Q	N	Q	A	I	L	K	Q	Y	I	E	R	T	L	K	T	Q	A	A
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		G	G	N	A	G	G	G	G	Q	P	G	W	I	L	K	C	K	G	W	E	T	D	P	N	A	Y	I	Y	F	T	I	Q	E	Q	N	W	E	N	T	C	K	A	I	G	K	P	E	W	I	T	D	P	A	Y	S	T	A	H	A	R	Q	P	H	I	F	D	I	F	A	E	I	E	K	Y	T	V	T	I	D	K
Template Known Secondary structure			T	T			S	S	S	S								T	T	T	T	T		T	T									G	G	G								T	T		G	G	G	G	T		T	T	T	S	S					G	G	G													T	T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		E	V	W	L	A	R	I	H	E	V	G	V	P	V	A	P	L	L	S	V	A	E	A	I	K	L	P	Q	T	Q	A	R	N	M	L	I	E	A	.	.	.	.	.	G	G	I	M	M	P	G	N	P	I	K	I	S	G	C	A	D	P	H	V	M	P	G	A	A	T	L	D	Q	H	G	E	Q	I	R	Q	E
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.																				.	.
Template Conservation																																																																.	.
Template Sequence		H	E	A	V	A	Y	L	T	Q	F	D	I	P	C	A	P	V	L	S	X	K	E	I	S	L	D	P	S	L	R	Q	S	G	S	V	V	E	V	E	Q	P	L	R	G	K	Y	L	T	V	G	C	P	X	K	F	S	A	F	T	P	D	I	.	.	K	A	A	P	L	L	G	E	H	T	A	A	V	L	Q	E
Template Known Secondary structure									G	G	G	T																					T	T	S							T	T	T									S	S			S	S						.	.						T	T	T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		379	380
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		402	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions