Return to main results Retrieve Phyre Job Id

Job DescriptionP76518
Confidence24.93%DateThu Jan 5 12:23:58 GMT 2012
Rank301Aligned Residues35
% Identity17%Templated1c0pa1
SCOP infoNucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain
Resolution1.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40........
Predicted Secondary structure 










Query SS confidence 


































Query Sequence  LVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGD
Query Conservation 



     


 
  



 







 
  

Alig confidence 


































Template Conservation   







 




  
   
  




      
Template Sequence  RVVVLGSGVIGLSSALILARKGYSVHILARDLPED
Template Known Secondary structure 

STT
SS
TT
Template Predicted Secondary structure 












Template SS confidence 


































   1006...1010.........1020.........1030.........1040
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions