Job Description P76518 Confidence 76.18% Date Thu Jan 5 12:23:58 GMT 2012 Rank 72 Aligned Residues 95 % Identity 9% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	E	G	L	L	V	I	D	M	T	H	V	L	N	G	P	F	G	T	.	Q	L	L	C	N	M	G	A	R	V	I	K	V	E	P	P	G	H	G	D	D	T	R	T	F	G	P	Y	V	D	G	Q	S	L	Y	Y	S	F	I	N	H	G	K	E	S	V	V	L	D	L	K	N	D	H	D	K	S	I	F	I
Query Conservation																					.
Alig confidence																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	E	T	E	K	A	L	G	A	E	R	V	.	.	.	.	.	.	.	.	.	.	D	S	L	E
Template Known Secondary structure		S	T	T	S								S													T	T									S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	L	K	Q	A	D	V	L	A	E	N	F	R	P	G	T	M	E	K	L	G	F	S	W	E	T	L	Q	E	I	N	P	R	L	I	Y	A	S	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	V	N	T	A
Template Known Secondary structure								S									S	G	G	G	T	T		B								S		T	T							S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions