Job Description P0AC02 Confidence 99.69% Date Thu Jan 5 11:16:49 GMT 2012 Rank 24 Aligned Residues 206 % Identity 12% Template c3fp4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tpr repeat-containing protein yhr117w; PDBTitle: crystal structure of tom71 complexed with ssa1 c-terminal2 fragment Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	P	P	N	E	I	Y	A	T	A	Q	Q	K	L	Q	D	G	N	W	R	Q	A	I	T	Q	L	E	A	L	D	N	R	Y	P	F	G	P	Y	S	Q	Q	V	Q	L	D	L	I	Y	A	Y	Y	K	N	A	D	L	P	L	A	Q	A	A	I	D	R	F	I	R	L	N	P	T	H	P	N	I	D	Y	V
Query Conservation
Alig confidence																																								.	.	.																																					.	.	.
Template Conservation																																								.	.	.																																					.	.	.
Template Sequence		H	P	T	P	N	S	Y	I	F	L	A	L	T	L	A	D	K	E	N	S	Q	E	F	F	K	F	F	Q	K	A	V	D	L	N	P	E	Y	P	.	.	.	P	T	Y	Y	H	R	G	Q	M	Y	F	I	L	Q	D	Y	K	N	A	K	E	D	F	Q	K	A	Q	S	L	N	P	E	N	V	Y	P	.	.	.
Template Known Secondary structure															T			T	T																	T	T			.	.	.													T	T																	T	T					.	.	.
Template Predicted Secondary structure																																								.	.	.																																					.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	Y	M	R	G	L	T	N	M	A	L	D	D	S	A	L	Q	G	F	F	G	V	D	R	S	D	R	D	P	Q	H	A	R	A	A	F	S	D	F	S	K	L	V	R	G	Y	P	N	S	Q	Y	T	T	D	A	T	K	R	L	V	F	L	K	D	R	L	A	K	Y	E	Y	S	V	A	E	Y	Y	T	E	.
Query Conservation																																																																																	.
Alig confidence																																	.																																																.
Template Conservation																																	.
Template Sequence		Y	I	Q	L	A	C	L	L	Y	K	Q	G	K	F	T	E	S	E	A	F	F	N	E	T	K	L	K	F	P	T	L	.	P	E	V	P	T	F	F	A	E	I	L	T	D	R	G	D	F	D	T	A	I	K	Q	Y	D	I	A	K	R	L	E	E	V	Q	E	K	I	H	V	G	I	G	P	L	I	G	K	A
Template Known Secondary structure												T	T																	T	T		.	T													T	T																				S	S		S	S	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
												188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	R	G	A	W	V	A	V	V	N	R	V	E	G	M	L	R	D	Y	P	D	T	Q	A	T	R	D	A	L	P	L	M	E	N	A	Y	R	Q	M	Q	M	N	A	Q	A	E	K	V	A	K	I	I	A	A	N	S	S	N
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																		.	.	.
Template Sequence		T	I	L	A	R	Q	S	S	L	D	E	E	K	F	N	A	A	I	K	L	L	T	K	A	C	E	L	D	P	R	S	E	.	.	.	Q	A	K	I	G	L	A	Q	L	K	L	Q	M	E	K	I	D	E	A	I	E	L	F	E	D	S	A	I	L	A	R	T
Template Known Secondary structure								T																						T	T			.	.	.													T	T																		S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.				560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions