Job Description P0AC02 Confidence 99.92% Date Thu Jan 5 11:16:49 GMT 2012 Rank 3 Aligned Residues 211 % Identity 14% Template c2vq2A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:putative fimbrial biogenesis and twitching PDBTitle: crystal structure of pilw, widely conserved type iv pilus2 biogenesis factor Resolution 1.54 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	P	P	N	E	I	Y	A	T	A	Q	Q	K	L	Q	D	G	N	W	R	Q	A	I	T	Q	L	E	A	L	D	N	R	Y	P	F	G	P	Y	S	Q	Q	V	Q	L	D	L	I	Y	A	Y	Y	K	N	A	D	L	P	L	A	Q	A	A	I	D	R	F	I	R	L	N	P	T	H	P	N	I	D	Y	V
Query Conservation
Alig confidence																																								.	.	.																																					.
Template Conservation																																								.	.	.																																					.
Template Sequence		N	Q	V	S	N	I	K	T	Q	L	A	M	E	Y	M	R	G	Q	D	Y	R	Q	A	T	A	S	I	E	D	A	L	K	S	D	P	K	N	E	.	.	.	L	A	W	L	V	R	A	E	I	Y	Q	Y	L	K	V	N	D	K	A	Q	E	S	F	R	Q	A	L	S	I	K	P	D	S	A	E	I	.	N	N
Template Known Secondary structure																		T	T																	T	T			.	.	.													T	T																	T	T					.
Template Predicted Secondary structure																																								.	.	.																																					.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	M	R	G	L	T	N	M	A	L	D	D	S	A	L	Q	G	F	F	G	V	D	R	S	D	R	D	P	Q	H	A	R	A	A	F	S	D	F	S	K	L	V	R	G	Y	P	N	S	Q	Y	T	T	D	A	T	K	R	L	V	F	L	K	D	R	L	A	K	Y	E	Y	S	V	A	E	Y	Y	T	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	G	W	F	L	C	G	R	L	N	R	P	A	E	S	M	A	Y	F	D	K	A	L	A	D	P	T	Y	P	T	P	Y	I	A	N	L	N	K	G	I	C	S	A	K	Q	G	Q	F	G	L	A	E	A	Y	L	K	R	S	L	A	A	Q	P	Q	F	P	P	A	F	K	E	L	A	R	T	K	M	L	A
Template Known Secondary structure									T	T	T															T	S	T	T		S																T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	W	V	A	V	V	N	R	V	E	G	M	L	R	D	Y	P	D	T	Q	A	T	R	D	A	L	P	L	M	E	N	A	Y	R	Q	M	Q	M	N	A	Q	A	E	K	V	A	K	I	I	A	A	N	S	S	N	T
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		G	Q	L	G	D	A	D	Y	Y	F	K	K	Y	Q	S	R	V	E	V	L	Q	.	.	A	D	D	L	L	L	G	W	K	I	A	K	A	L	G	N	A	Q	A	A	Y	E	Y	E	A	Q	L	Q	A	N	F	P	Y	S
Template Known Secondary structure		T																		S			.	.														T	T																	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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