Job Description P0AC02 Confidence 99.92% Date Thu Jan 5 11:16:49 GMT 2012 Rank 4 Aligned Residues 209 % Identity 11% Template c2ho1B_ PDB info PDB header:protein binding Chain: B: PDB Molecule:type 4 fimbrial biogenesis protein pilf; PDBTitle: functional characterization of pseudomonas aeruginosa pilf Resolution 2.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	P	P	N	E	I	Y	A	T	A	Q	Q	K	L	Q	D	G	N	W	R	Q	A	I	T	Q	L	E	A	L	D	N	R	Y	P	F	G	P	Y	S	Q	Q	V	Q	L	D	L	I	Y	A	Y	Y	K	N	A	D	L	P	L	A	Q	A	A	I	D	R	F	I	R	L	N	P	T	H	P	N	I	D	Y
Query Conservation
Alig confidence																																									.	.	.																																					.	.
Template Conservation																																									.	.	.																																					.	.
Template Sequence		R	D	E	A	R	D	A	Y	I	Q	L	G	L	G	Y	L	Q	R	G	N	T	E	Q	A	K	V	P	L	R	K	A	L	E	I	D	P	S	S	A	.	.	.	D	A	H	A	A	L	A	V	V	F	Q	T	E	X	E	P	K	L	A	D	E	E	Y	R	K	A	L	A	S	D	S	R	N	A	R	V	.	.
Template Known Secondary structure																		T	T	T																	T	T			.	.	.													T	T															S	S	S						.	.
Template Predicted Secondary structure																																									.	.	.																																					.	.
Template SS confidence
		1033	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.				.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		V	M	Y	M	R	G	L	T	N	M	A	L	D	D	S	A	L	Q	G	F	F	G	V	D	R	S	D	R	D	P	.	Q	H	A	R	A	A	F	S	D	F	S	K	L	V	R	G	Y	P	N	S	Q	Y	T	T	D	A	T	K	R	L	V	F	L	K	D	R	L	A	K	Y	E	Y	S	V	A	E	Y	Y	T
Query Conservation																																.
Alig confidence		.																														.
Template Conservation		.
Template Sequence		.	L	N	N	Y	G	G	F	L	Y	E	Q	K	R	Y	E	E	A	Y	Q	R	L	L	E	A	S	Q	D	T	L	Y	P	E	R	S	R	V	F	E	N	L	G	L	V	S	L	Q	X	K	K	P	A	Q	A	K	E	Y	F	E	K	S	L	R	L	N	R	N	Q	P	S	V	A	L	E	X	A	D	L	L	Y
Template Known Secondary structure		.											T	T													T	T		T	T		T	T															T	T																	S
Template Predicted Secondary structure		.
Template SS confidence
			1108	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	A	W	V	A	V	V	N	R	V	E	G	M	L	R	D	Y	P	D	T	Q	A	T	R	D	A	L	P	L	M	E	N	A	Y	R	Q	M	Q	M	N	A	Q	A	E	K	V	A	K	I	I	A	A	N	S	S	N	T
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		K	E	R	E	Y	V	P	A	R	Q	Y	Y	D	L	F	A	Q	G	G	G	Q	N	A	.	.	.	R	S	L	L	L	G	I	R	L	A	K	V	F	E	D	R	D	T	A	A	S	Y	G	L	Q	L	K	R	L	Y	P	G	S
Template Known Secondary structure			T	T														T	T						.	.	.													T	T																	S	S	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		1187	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.				1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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