Job Description P18310 Confidence 98.18% Date Thu Jan 5 11:36:46 GMT 2012 Rank 23 Aligned Residues 94 % Identity 22% Template c3stbC_ PDB info PDB header:rna binding protein/immune system Chain: C: PDB Molecule:rna-editing complex protein mp42; PDBTitle: a complex of two editosome proteins and two nanobodies Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		R	G	I	N	K	V	I	L	V	G	R	L	G	K	D	P	E	V	R	Y	I	P	N	G	G	A	V	A	N	L	Q	V	A	T	S	E	S	W	R	D	K	Q	T	G	E	M	R	E	Q	T	E	W	H	R	V	V	L	F	G	K	L	.	A	E	V	A	G	E	C	L	R	K	G	A	Q	V	Y	I	E	G
Query Conservation																																																															.
Alig confidence																.									.																			.	.	.	.																.
Template Conservation																.									.																			.	.	.	.
Template Sequence		R	C	V	N	H	C	V	M	L	G	V	V	Q	N	.	I	Q	E	G	F	V	F	E	.	D	K	V	L	Q	F	T	L	I	T	D	F	E	G	P	S	P	G	.	.	.	.	D	P	D	K	D	F	H	T	V	R	V	F	D	S	D	Y	S	S	R	V	K	E	Q	L	R	D	G	E	W	F	L	V	T	G
Template Known Secondary structure		S		S	S											.							T	T	.													S	S			T	T	.	.	.	.	S		S										S													T	T
Template Predicted Secondary structure																.									.																			.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Q	L	R	T	R	S	W	E	D	N	G	I	T	R	Y	.	.	V	T	E	I	L	V
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		R	L	R	M	V	P	Q	Y	D	G	S	M	R	K	Y	Y	H	Y	P	V	I	Q	V
Template Known Secondary structure											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions