Return to main results Retrieve Phyre Job Id

Job DescriptionP18310
Confidence52.45%DateThu Jan 5 11:36:46 GMT 2012
Rank59Aligned Residues96
% Identity19%Templatec3kf8C_
PDB info PDB header:structural proteinChain: C: PDB Molecule:protein stn1; PDBTitle: crystal structure of c. tropicalis stn1-ten1 complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.... .....80.
Predicted Secondary structure 

























...

Query SS confidence 





































































. . .






Query Sequence  GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGECLRK. . . GAQVYIE
Query Conservation   

 
 
 
 
  


      
     
 

                
    
      
      
 
...
  
 
 
Alig confidence 












.


















....





....






















...






Template Conservation 

  
 
 
 

 .   
            


....





....    
 
                   
  
 
 
Template Sequence  PVNQINIFGKIVY. EQYKEKEFNGVEESYVILV. . . . ISDFIG. . . . IDSKIRVRLSQEQFKEVGLTLDKKNYGKIVELE
Template Known Secondary structure 
.

BTTB

....

SS....SS
TT

SSS

TT
Template Predicted Secondary structure 

.









....




....
















Template SS confidence 















































































   81........90... ......100.........110.. ...... .120.........130.........140.........150.
 
   82.......90.........100.........
Predicted Secondary structure 





Query SS confidence 



























Query Sequence  GQLRTRSWEDNGITRYVTEILVKTTGTM
Query Conservation 
 
        
       
 
  
   
Alig confidence 



























Template Conservation 
 
               

 

 
  
Template Sequence  GEIYNWYDSINVSKKPDRELKVSKITVL
Template Known Secondary structure 


SSSTTS


Template Predicted Secondary structure 







Template SS confidence 



























   152.......160.........170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions