Job Description P18310 Confidence 98.00% Date Thu Jan 5 11:36:46 GMT 2012 Rank 24 Aligned Residues 92 % Identity 24% Template c3k81D_ PDB info PDB header:immune system, rna binding protein Chain: D: PDB Molecule:mp18 rna editing complex protein; PDBTitle: structure of the central interaction protein from the trypanosoma2 brucei editosome in complex with single domain antibodies Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		G	I	N	K	V	I	L	V	G	R	L	G	K	D	P	E	V	R	Y	I	P	N	G	G	A	V	A	N	L	Q	V	A	T	S	E	S	W	R	D	K	Q	T	G	E	M	R	E	Q	T	E	W	H	R	V	V	L	F	G	K	L	A	.	E	V	A	G	E	C	L	R	K	G	A	Q	V	Y	I	E	G	Q
Query Conservation																																																															.
Alig confidence															.									.														.	.	.	.	.																					.
Template Conservation															.									.														.	.	.	.	.
Template Sequence		S	V	N	S	V	T	L	V	G	V	V	H	D	.	I	Q	S	G	F	V	Y	E	.	D	A	V	T	Q	F	T	L	T	T	T	S	I	.	.	.	.	.	D	T	E	V	V	V	E	K	D	H	H	T	I	R	C	F	G	E	L	F	S	A	E	V	K	Q	K	V	K	E	G	N	V	V	C	V	N	G	R
Template Known Secondary structure															.							T	T	.														.	.	.	.	.																	S													T	T
Template Predicted Secondary structure															.									.														.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	R	T	R	S	W	E	D	N	G	I	T	R	Y	.	.	V	T	E	I	L	V
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		L	R	L	S	P	Q	L	E	P	S	C	N	K	H	F	Y	F	P	Y	I	Q	V
Template Known Secondary structure										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions