Job Description P18310 Confidence 95.35% Date Thu Jan 5 11:36:46 GMT 2012 Rank 27 Aligned Residues 84 % Identity 17% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		R	G	I	N	K	V	I	L	V	G	R	L	G	K	.	.	D	P	E	V	R	Y	I	P	N	G	G	A	V	A	N	L	Q	V	A	T	S	E	S	W	R	D	K	Q	T	G	E	M	R	E	Q	T	E	W	H	R	V	V	L	F	G	K	L	A	E	V	A	G	E	C	L	R	K	G	A	Q	V	Y	I	E
Query Conservation																.	.
Alig confidence						.										.	.																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation						.																																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		P	G	M	T	.	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	.	.	.	.	.	.	.	.	.	.	.	.	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	D	I	.	.	.	D	V	G	R	G	D	Y	V	R	V	R
Template Known Secondary structure		S	S			.																			T	T	S											.	.	.	.	.	.	.	.	.	.	.	.			T	T									G	G	G	G	G	S	.	.	.				T	T
Template Predicted Secondary structure						.																																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		13	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	R	T	R	S	W	E	D	N	G	I	T	R	Y	V	T	E	I	L	V	K	T	T	G	T	M	Q
Query Conservation
Alig confidence				.								.	.	.	.	.	.
Template Conservation				.								.	.	.	.	.	.
Template Sequence		G	Y	.	I	R	E	G	Y	Y	G	.	.	.	.	.	.	G	L	E	C	T	A	N	Y	V	E	I	L	K
Template Known Secondary structure				.					T	T	S	.	.	.	.	.	.	S
Template Predicted Secondary structure				.								.	.	.	.	.	.
Template SS confidence
		77	.		.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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