Return to main results Retrieve Phyre Job Id

Job DescriptionP0A862
Confidence100.00%DateThu Jan 5 11:07:00 GMT 2012
Rank8Aligned Residues163
% Identity20%Templatec3kebB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:probable thiol peroxidase; PDBTitle: thiol peroxidase from chromobacterium violaceum
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCIS
Query Conservation                
 

  

 
 
    
  
 


  

  

 
     
  
      
              
 
Alig confidence 















































































Template Conservation             
  
 

  

 
 
    
  


 

 

  

 
        
      
           
 

 
Template Sequence  VQYGDEXLPVIGDFPRKGDYLPSFXLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDSWPHLKLIV
Template Known Secondary structure  TT
BS



TT
B



TTS
GGGSTT


S
TT
STTTSTT
TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   85....90.........100... ......110.........120.........130.........140.........150.........160...
Predicted Secondary structure 






.

































Query SS confidence 


















.



























































Query Sequence  ADLPFAQSRFCGAEGLNNV. ITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAAL
Query Conservation                     .                             
  



  
 
             
   

Alig confidence 


















.



























































Template Conservation 

 
                     
         
             
  



  
 
            

  

 
Template Sequence  ITVDSPSSLARARHEHGLPNIALLSTLRRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIE
Template Known Secondary structure  SS
T

S




TT
B

STTSTT
B


TT
B
SBTT



Template Predicted Secondary structure 







































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   164...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  AVLK
Query Conservation    

Alig confidence 



Template Conservation    

Template Sequence  KLLQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   167..170
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions