Job Description P0A862 Confidence 91.78% Date Thu Jan 5 11:07:00 GMT 2012 Rank 219 Aligned Residues 116 % Identity 16% Template c3feuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri Resolution 1.76 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	R	K	V	L	N	I	F	P	S	I	D	T	G	V	C	A	A	S	V	R	K	F	N	Q	L	A	T	E	I	D	N	T	V	V	L	C	I	S	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	X	A	P	V	T	E	V	F	.	A	L	S	C	G	H	C	R	N	X	E	N	F	L	P	V	I	S	Q	E	A	G	T	D	I	G	K	X	H	I	T	F	N	Q	S	A	H	I	A	S	X	F	Y	Y	A	A	E	X	Q	V	D	G	A	P	D	H	A	F	X	E	D	L	F	A	A	T	Q	X	G	E
Template Known Secondary structure					S						.		T	T								G	G	G									T	S									S	S	S														T	T	S	S	S	S														T			T
Template Predicted Secondary structure											.
Template SS confidence
		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
									88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																													.
Query SS confidence		.	.	.	.	.	.	.																																													.
Query Sequence		.	.	.	.	.	.	.	P	F	A	Q	S	R	F	C	G	A	E	G	L	N	N	V	I	T	L	S	T	F	R	N	A	E	F	L	Q	A	Y	G	V	A	I	A	D	G	P	L	K	G	L	A	.	A	R	A	V	V	V	I	D	E	N	D	N	V	I	F	S	Q	L	V	D	E	I	T	T	E	P	D	Y
Query Conservation		.	.	.	.	.	.	.																																													.
Alig confidence		.	.	.	.	.	.	.																																													.							.	.	.				.	.
Template Conservation																																																												.	.	.				.	.
Template Sequence		G	T	T	L	T	E	Q	Q	E	A	Y	S	K	A	F	T	S	R	G	L	V	S	P	Y	D	F	N	E	E	Q	R	D	T	L	I	K	K	V	D	N	A	K	X	L	S	E	K	S	G	I	S	S	V	P	T	F	V	V	.	.	.	N	G	K	.	.	Y	N	V	L	I	G	G	H	D	D	P	K	Q	I
Template Known Secondary structure		T	S															T	T	T				G	G	G																								T			S	S	S					.	.	.	T	T	T	.	.					G	G	G		S	S
Template Predicted Secondary structure																																																												.	.	.				.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.
		160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	L	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	T	I	R	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions