Job Description P0A862 Confidence 99.95% Date Thu Jan 5 11:07:00 GMT 2012 Rank 31 Aligned Residues 145 % Identity 17% Template c2ywiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																																								.	.	.	.
Query SS confidence																						.																																																								.	.	.	.
Query Sequence		T	V	A	N	S	I	P	Q	A	G	S	K	A	Q	T	F	T	L	V	A	.	K	D	L	S	D	V	T	L	G	Q	F	A	G	K	R	K	V	L	N	I	F	P	S	I	D	T	G	V	C	A	A	S	V	R	K	F	N	Q	L	A	T	E	I	D	N	T	V	V	L	C	I	S	A	D	L	.	.	.	.
Query Conservation																						.																																																								.	.	.	.
Alig confidence																						.																																																								.	.	.	.
Template Conservation
Template Sequence		A	V	E	S	N	X	F	P	L	G	K	Q	A	P	P	F	A	L	T	N	V	I	D	G	N	V	V	R	L	E	D	V	K	S	D	A	A	T	V	I	X	F	I	C	N	H	C	P	F	V	K	H	V	Q	H	E	L	V	R	L	A	N	D	Y	X	P	K	G	V	S	F	V	A	I	N	S	N	D	A	E
Template Known Secondary structure										T	T		B									T	T	T												S	S									S	S																			G	G	G	T									S		T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
								88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																						.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																																						.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	F	A	Q	S	R	F	C	G	A	E	G	L	N	N	V	I	T	L	S	T	F	R	N	A	E	F	L	Q	A	Y	G	V	A	I	A	D	G	P	L	K	G	L	A	A	R	A	V	V	V	I	D	E	N	D	N	V	I	F	S	Q	L	V	D	E	I	T	T	E	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																																																																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.	.												.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																													.	.												.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	P	E	D	S	P	E	N	X	K	K	V	A	E	E	L	G	Y	P	F	P	Y	L	Y	D	E	.	.	T	Q	E	V	A	K	A	Y	D	A	A	.	.	.	.	.	.	.	.	.	C	T	P	D	F	Y	I	F	D	R	D	L	K	C	V	Y	R	G	Q	L	D	D	S	R	P	N	N	G	I	P	V
Template Known Secondary structure		T		G	G	G	S												T			S						S	.	.	S								T			.	.	.	.	.	.	.	.	.			S							T	T		B							S	S	S			T	T	T
Template Predicted Secondary structure																													.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
				157	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	D	Y	E	A	A	L	A	V	L	K	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	G	E	S	I	R	A	A	L	D	A	L	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions