Job Description P0A862 Confidence 99.79% Date Thu Jan 5 11:07:00 GMT 2012 Rank 86 Aligned Residues 147 % Identity 19% Template c2k6vA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus Resolution UNK

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																																																															.	.	.	.	.										.	.	.	.
Query SS confidence																																																															.	.	.	.	.										.	.	.	.
Query Sequence		P	Q	A	G	S	K	A	Q	T	F	T	L	V	A	K	D	L	S	D	V	T	L	G	Q	F	A	G	K	R	K	V	L	N	I	F	P	S	I	D	T	G	V	C	A	A	S	V	R	K	F	N	Q	L	A	T	E	I	D	N	T	V	.	.	.	.	.	V	L	C	I	S	A	D	L	P	.	.	.	.	F
Query Conservation																																																															.	.	.	.	.										.	.	.	.
Alig confidence																			.																																												.	.	.	.	.										.	.	.	.
Template Conservation																			.
Template Sequence		R	L	L	N	P	K	P	V	D	F	A	L	E	G	P	Q	G	.	P	V	R	L	S	Q	F	Q	D	K	V	V	L	L	F	F	G	F	T	R	C	P	D	V	C	P	T	T	L	L	A	L	K	R	A	Y	E	K	L	P	P	K	A	Q	E	R	V	Q	V	I	F	V	S	V	D	P	E	R	D	P	P	E
Template Known Secondary structure																S	S	S	.				G	G	G	S	T	T	S									T	T		S	S														T	T	S						T	T								S		T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																									.										.	.	.	.	.
Query SS confidence																									.										.	.	.	.	.
Query Sequence		A	Q	S	R	F	C	G	A	E	G	L	N	N	V	I	T	L	S	T	F	R	N	A	.	E	F	L	Q	A	Y	G	V	A	.	.	.	.	.	I	A	D	G	P	L	K	G	L	A	A	R	A	V	V	V	I	D	E	N	D	N	V	I	F	S	Q	L	V	D	E	I	T	T	E	P	D	Y	E	A	A	L
Query Conservation																									.										.	.	.	.	.
Alig confidence																									.										.	.	.	.	.
Template Conservation
Template Sequence		V	A	D	R	Y	A	K	A	F	H	P	S	F	L	G	L	S	G	S	P	E	A	V	R	E	A	A	Q	T	F	G	V	F	Y	Q	K	S	Q	Y	R	G	P	G	E	Y	L	V	D	H	T	A	T	T	F	V	V	K	E	G	R	L	V	L	L	Y	S	P	D	K	A	E	A	T	D	R	V	V	A	D	L
Template Known Secondary structure												T	T																			T											T	T															T	T												T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		164	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		169	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions