Return to main results Retrieve Phyre Job Id

Job DescriptionP09557
Confidence5.41%DateThu Jan 5 11:02:27 GMT 2012
Rank8Aligned Residues15
% Identity33%Templated1ny722
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Comoviridae-like VP
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20
Predicted Secondary structure 







Query SS confidence 














Query Sequence  PNVNTSEGCFEIGVT
Query Conservation   
  


  




 
Alig confidence 














Template Conservation 
  


 


 



Template Sequence  STTGTISGDFNLGVK
Template Known Secondary structure 
BB
SS


Template Predicted Secondary structure 






Template SS confidence 














   333......340.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions