Return to main results Retrieve Phyre Job Id

Job DescriptionP77170
Confidence94.13%DateWed Jan 25 15:21:10 GMT 2012
Rank86Aligned Residues48
% Identity19%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160....... ..170.........180.........190......
Predicted Secondary structure 






.









Query SS confidence 


















.




























Query Sequence  PPVLNEEQKQAVFERIKSG. VSISAIAREFKTSRQTILRAKAKLQTPDI
Query Conservation             
      
. 
   

  
  
 


 
 
        
Alig confidence 


















.




























Template Conservation    


     

  
      
  


    
    

  
  
   

Template Sequence  KLSFKPSDVRIYSLLLERGGXRVSEIARELDLSARFVRDRLKVLLKRGF
Template Known Secondary structure  T




B
T

TTS
Template Predicted Secondary structure 


















Template SS confidence 
















































   14.....20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions