Return to main results Retrieve Phyre Job Id

Job DescriptionP77170
Confidence99.87%DateWed Jan 25 15:21:10 GMT 2012
Rank8Aligned Residues116
% Identity25%Templatec3pkzK_
PDB info PDB header:recombinationChain: K: PDB Molecule:recombinase sin; PDBTitle: structural basis for catalytic activation of a serine recombinase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRK
Query Conservation 
  
 



  



 
               
  
    
     
     

      
 


  





       
Alig confidence 
































.....









































Template Conservation   


 



  
 
  
   
          
 .....        
     
       
 


  



 
       
Template Sequence  IIGYARVSSLDQNLERQLENLKTFGAEKIFTEK. . . . . QSGKSIENRPILQKALNFVEMGDRFIVESIDRLGRNYNEVIH
Template Known Secondary structure  SSTTS
TT
S.....S
SS
STT


TT
SSGGGT
S
Template Predicted Secondary structure 










.....


















Template SS confidence 















































































   2.......10.........20.........30.... .....40.........50.........60.........70......
 
   84.....90.........100......... 110.........120....
Predicted Secondary structure 














.......
Query SS confidence 

























. . . . . . .














Query Sequence  TVEQLTETGIRVHCLALGGIDLTSPT. . . . . . . GKMMMQVISAVAEFE
Query Conservation      
   

 
              .......              
Alig confidence 

























.......














Template Conservation      
   

 
                       
   
    

 
Template Sequence  TVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIRILAMVSEQE
Template Known Secondary structure  TT
TT
GGGGS

SS
Template Predicted Secondary structure 

















Template SS confidence 















































   77..80.........90.........100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions