Return to main results Retrieve Phyre Job Id

Job DescriptionP77170
Confidence87.39%DateWed Jan 25 15:21:10 GMT 2012
Rank208Aligned Residues35
% Identity14%Templatec3m1eA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190...
Predicted Secondary structure 








Query SS confidence 


































Query Sequence  AVFERIKSGVSISAIAREFKTSRQTILRAKAKLQT
Query Conservation   
      
 
   

  
  
 


 
 
     
Alig confidence 


































Template Conservation    
  
   

   

  
 


 


  
  

 
Template Sequence  RYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEE
Template Known Secondary structure  T
TTS
Template Predicted Secondary structure 





Template SS confidence 


































   7..10.........20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions