Job Description P77170 Confidence 99.87% Date Wed Jan 25 15:21:10 GMT 2012 Rank 7 Aligned Residues 140 % Identity 17% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																																	.	.
Query SS confidence																.	.																																																	.	.
Query Sequence		S	Q	I	F	A	Y	C	R	I	S	T	L	D	Q	.	.	T	T	E	N	Q	R	R	E	I	E	S	A	G	F	K	I	K	P	Q	Q	I	I	E	E	H	I	S	G	S	A	A	T	S	E	R	P	G	F	N	R	L	L	A	R	L	K	C	G	.	.	D	Q	L	I	V	T	K	L	D	R	L	G	C	N
Query Conservation																.	.																																																	.	.
Alig confidence																.	.																												.																					.	.
Template Conservation																																													.
Template Sequence		A	K	I	I	G	Y	A	R	V	S	F	N	A	Q	K	D	D	L	E	R	Q	I	Q	L	I	K	S	Y	A	E	E	N	G	W	D	I	Q	I	L	K	D	I	G	.	S	G	L	N	E	K	R	K	N	Y	K	K	L	L	K	X	V	X	N	R	K	V	E	K	V	I	I	A	Y	P	D	R	L	T	R	F
Template Known Secondary structure											S	S	G	G	G																		T	T										S	.		T	T		T	T													T	T								S	S						S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	D	I	R	K	T	V	E	Q	L	T	E	T	G	I	R	V	H	C	L	A	L	G	G	I	D	L	T	S	P	T	G	K	M	M	M	Q	V	I	S	A	V	A	E	F	E	R	D	L	L	L	E	R	T	H	S	G	I	V	R	A	R	G	A	G	K
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		G	F	E	T	.	.	L	K	E	F	F	K	S	Y	G	T	E	I	V	I	I	N	K	K	H	K	T	P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X	H	S	H	K	Y	K	K	L	T	K	T	V	K	E	I	V	R
Template Known Secondary structure						.	.								T	T						S		S	S																										T	T																T
Template Predicted Secondary structure						.	.
Template SS confidence
		141	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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