Job Description P77170 Confidence 93.59% Date Wed Jan 25 15:21:10 GMT 2012 Rank 98 Aligned Residues 163 % Identity 12% Template c3klnC_ PDB info PDB header:transcription Chain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst Resolution 3.08 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	R	E	I	E	S	A	G	F	K	I	K	P	Q	Q	I	I	E	E	H	I	S	G	S	A	A	T	S	E	R	P	G	F	N	R	L	L	A	R	L	K	C	G	D	Q	L	I	V	T	K	L	D	R	L	G	C	N	A	M	D	I	R	K	T	V	E	Q	L	T	E	T	G	I	R	V	H	C	L	A	.
Query Conservation																																																																																	.
Alig confidence																								.	.	.	.	.	.	.	.																																																		.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		S	R	L	L	K	E	A	L	E	S	K	L	P	L	A	L	E	I	T	P	F	S	.	.	.	.	.	.	.	.	E	L	W	L	E	E	N	K	P	E	S	R	S	I	Q	M	L	V	I	D	Y	S	R	I	S	D	D	V	L	T	D	Y	S	S	F	K	H	I	S	C	P	D	A	K	E	V	I	I	N	C
Template Known Secondary structure													S	S								G	G	.	.	.	.	.	.	.	.	G	G	G	G	T	T	T		S	G	G	G	G								G	G	G			T	T	T													T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
																	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	I	D	L	T	S	P	T	G	K	M	M	M	Q	V	I	S	A	V	A	E	F	E	R	D	L	L	L	E	R	T	H	S	G	I	V	R	A	R	G	A	G	K	R	F	G	R	P	P	V	L	N	E	E	Q	K	Q	A	V	F	E	R	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	D	I	E	H	K	L	L	F	K	W	N	N	L	A	G	V	F	Y	I	D	D	D	M	D	T	L	I	K	G	M	S	K	I	L	Q	D	E	M	W	L	T	R	K	L	A	Q	E	Y	I	L	H	Y	R	A	G	N	S	V	V	T	S	Q	M	Y	A	K	L	T	K	R	E	Q	Q	I	I	K	L	L
Template Known Secondary structure			S	S			G	G	G	G	G	G	S	T	T							T	T															T	T			B																T							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	G	V	S	I	S	A	I	A	R	E	F	K	T	S	R	Q	T	I	L	R	A	K	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	G	A	S	N	I	E	I	A	D	K	L	F	V	S	E	N	T	V	K	T	H	L	H	N	V
Template Known Secondary structure			T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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