 |
Job Description | P77170 | Confidence | 52.38% | Date | Wed Jan 25 15:21:10 GMT 2012 |
Rank | 391 | Aligned Residues | 38 |
% Identity | 13% | Template | c3df8A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:possible hxlr family transcriptional factor; |
PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
|
Resolution | 1.65 Å |
|
  |   |
159 | 160 | . | . | . | . | . | . | . | |
|
|
. | . | 170 | . | . | . | . | . | . | . | |
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | F | E | R | I | K | S | G | . |
. |
. |
V | S | I | S | A | I | A | R | E | F | . |
K | T | S | R | Q | T | I | L | R | A | K | A | K | L | Q | T | P | D | I |
Query Conservation |   |
  |
|   |   |   |   |   |   |
| . | . | . |   |
|   |   |   |
|
|   |   |
| . |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
|   |
|
|
|   |
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|
Template Sequence |   |
L | I | I | S | V | L | G | N | G | S | T | R | Q | N | F | N | D | I | R | S | S | I | P | G | I | S | S | T | I | L | S | R | R | I | K | D | L | I | D | S | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | S | S | S | S |
| B |
|  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|