|   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
|
|
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | I | E | T | A | S | G | A | V | L | K | A | R | S | I | I | V | A | T | G | A | K | W | R | N | M | N | V | P | G | E | D | Q | Y | R | T | K | G | V | T | Y | C | P | H | C | D | . |
. |
. |
G | P | L | F | K | G | K | R | V | A | V | I | G | G | G | N | S | G | V | E | A | A | I | D | L | A | G | I | V | E |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | R | I | V | I | L | G | G | G | P | A | G | Y | E | A | A | L | V | A | A | T | S | H | P | E | T | T | Q | V | T | V | I | D | C | D | G | I | G | G | A | A | V | L | D | D | C | V | P | S | K | T | F | I | A | S | T | G | L | R | T | E | L | R | R | A | P | H | L | G | F | H | K | I | S | L | P | Q | I | H | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  | S | S |
| T | T |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | T |
|
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
H | V | T | L | L | E | F | A | P | E | M | K | A | D | Q | V | L | Q | D | K | L | R | S | L | K | N | V | D | I | I | L | N | A | Q | T | T | E | V | K | G | D | G | S | K | V | V | G | L | E | Y | R | D | R | V | S | G | D | I | H | N | I | E | L | A | G | I | F | V | Q | I | G | L | L | P | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
| . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | V | K | T | L | A | A | . |
. |
. |
. |
. |
A | Q | S | A | D | I | T | A | Q | L | L | S | M | G | V | Q | V | I | A | G | R | G | E | L | I | D | S | T | P | G | L | A | R | H | . |
R | I | K | A | T | A | A | D | G | S | T | S | E | H | E | A | D | V | V | L | V | A | T | G | A | S | P | R | I | L | P | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | S |  |  |  |  |
|
| S | S | S |
|
| S | S |  | . |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | S |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
  |   |
|
|
|
|
|
454 | . | . | . | . | |
. | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . |
Predicted Secondary structure |   |
. | . | . | . | . |
|  |  |  |  | . |  |
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
N | T | N | W | L | . |
E | G | A | V | E | R | N | R | M | G | E | I | I | I | D | A | K | C | E | T | N | V | K | G | V | F | A | A | G | D | C | T | T | V | P | Y | K | Q | I | I | I | A | T | G | E | G | A | K | A | S | L | S | A |
Query Conservation |   |
. | . | . | . | . |
|   |   |
|
| . |   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|
|   |
|   |
|
|
|   |
|
|
|   |   |   |   | . |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
Template Sequence |   |
S | V | P | N | T | S | G | L | G | L | E | R | V | G | I | Q | L | G | R | G | N | Y | L | T | V | D | R | V | S | R | T | L | A | T | G | I | Y | A | A | G | D | C | T | G | L | L | . |
P | L | A | S | V | A | A | M | Q | G | R | I | A | M | Y | H | A |
Template Known Secondary structure |   |
 |  |  |
|
| S | S | S |
| T | T | T | T | T |
|
|
| B | T | T | T | B |
|
|
|
| S | S | S | B |
| S | S | T | T |  |  |  |
| S | G | G | G | T | S |
| . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
277 | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | |
. | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
  |