 |
Job Description | P35340 | Confidence | 99.06% | Date | Wed Jan 25 15:20:51 GMT 2012 |
Rank | 226 | Aligned Residues | 112 |
% Identity | 14% | Template | d1onfa2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.60 |
|
 |
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 400 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | M | N | V | P | G | E | D | Q | Y | R | T | K | G | V | T | Y | C | P | H | C | D | G | P | L | F | K | G | K | R | V | A | V | I | G | G | G | N | S | G | V | E | A | A | I | D | L | A | G | I | V | E | H | V | T | L | L | E | F | A | P | E | M | K | A | D | . |
. |
. |
. |
. |
Q | V | L | Q | D | K | L | R | S |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | P | P | V | K | G | I | E | N | . |
. |
. |
. |
. |
. |
T | I | S | S | D | E | F | F | N | I | K | E | S | K | K | I | G | I | V | G | S | G | Y | I | A | V | E | L | I | N | V | I | K | R | L | G | I | D | S | Y | I | F | A | R | G | N | R | I | L | R | K | F | D | E | S | V | I | N | V | L | E | N | D | M | K |
Template Known Secondary structure |   |
|
| S |
| T | T | G | G | G | . | . | . | . | . | . |
|  |  |  |  |  |  | T | T |
|
|
|
| S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
| S | S | S | S | S |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
154 | . | . | . | . | . | 160 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |
  |   |
403 | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | N | V | D | I | I | L | N | A | Q | T | T | E | V | K | G | D | G | S | K | V | V | G | L | E | Y | R | D | R | V | S | G | D | I | H | N | I | E | L | A | G | I | F | V | Q | I |
Query Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|
Template Sequence |   |
K | N | N | I | N | I | V | T | F | A | D | V | V | E | I | K | K | V | S | D | K | N | L | S | I | H | L | . |
. |
. |
. |
S | D | G | R | I | Y | E | H | F | D | H | V | I | Y | C | V |
Template Known Secondary structure |   |
 | T | T |
|  |  |  |
| S |
|
|  |  |  |  |  |  | S | S | T | T |
|  |  |  |  |  | . | . | . | . | T | T | S |
|  |  |  |  |  | S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
|
|
|
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|