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Job DescriptionP35340
Confidence100.00%DateWed Jan 25 15:20:51 GMT 2012
Rank31Aligned Residues289
% Identity25%Templatec3lxdA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: crystal structure of ferredoxin reductase arr from novosphingobium2 aromaticivorans
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230....... ..240.........250.........260.........270.........280........
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Query Sequence  DAYDVLIVGSGPAGAAAAIYSARKGIR. . TGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ
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Template Sequence  ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGRE. PEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGA
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STT

S
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B
SGGGGTTTTTTSS
SGGGBSS
TTT
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   8.10.........20.........30.........40... ......50.........60.........70.........80......
 
   289290.........300.........310.........320.........330.........340......... 350.........360....
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Query Sequence  SASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCD. . . . GPLFKGKRVAVIGGG
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Template Sequence  EVVSLDP. . . . . AAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGG
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T.....TTTTTS







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BT


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   87..90... ......100.........110.........120.........130.........140.........150.........160.
 
   365....370.........380.........390... ......400.........410.........420.........430........
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Query Sequence  NSGVEAAIDLAGIVEHVTLLEFAPEMKAD. . . . . . QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIH
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Template Sequence  YIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRM. . . . . QDGS
Template Known Secondary structure  TT
SSSSTTTTTS
TT
T

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   162.......170.........180.........190.........200.........210.........220.........230.. ....
 
   439440.........450.........460.........470.........480.........490..... ....500........
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Query Sequence  NIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK. . . . . . . . . . QIIIATGEGAKAS
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Template Sequence  VIPADIVIVGIGIVPCVGALI. SAGASGGNGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAA
Template Known Secondary structure 
S
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   237..240.........250....... ..260.........270.........280.........290.........300.........310.....
 
   509510.
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Query Sequence  LSA
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Template Sequence  KDI
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   316..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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