Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 62 Aligned Residues 298 % Identity 17% Template c3l8kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoyl dehydrogenase from2 sulfolobus solfataricus Resolution 2.50 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																				.	.	.	.	.	.	270	.
Predicted Secondary structure																																	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	.	.	R	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	G	Q	K	L	A	G
Query Conservation																																	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	V	V	V	I	G	A	G	G	A	G	Y	H	G	A	F	R	L	A	K	A	K	Y	N	V	L	M	A	D	P	K	G	E	L	G	G	N	C	L	Y	S	G	C	V	P	S	K	T	V	R	E	V	I	Q	T	A	W	R	L	T	N	I	A	I	P	L	D	F	S	T	V	Q	D	R	K	D	Y	V	Q
Template Known Secondary structure										S													T	T								T	T	S	S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	L	K	V	H	V	D	E	Y	D	V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	.	H	C	D	G
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		E	L	R	F	K	Q	H	K	R	N	M	S	Q	Y	E	T	L	T	F	Y	K	G	Y	V	K	I	K	D	P	T	H	V	I	V	K	T	D	E	G	K	E	I	E	A	E	T	R	Y	M	I	I	A	S	G	A	E	T	A	K	L	R	L	P	G	V	E	Y	C	L	T	S	D	D	I	F	G	Y	K	T	S
Template Known Secondary structure													T	T		T	T						S							T	T							T	T																									T	T	G	G	G		B							S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	.	.	.	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence		F	R	K	L	P	Q	D	M	V	I	I	G	A	G	Y	I	G	L	E	I	A	S	I	F	R	L	M	G	V	Q	T	H	I	I	E	M	L	D	R	A	L	I	T	L	E	D	Q	D	I	V	N	T	L	L	S	I	L	K	L	N	I	K	F	N	S	P	V	T	E	V	K	K	I	K	D	D	E	Y	E	V
Template Known Secondary structure				S			S								S													T	T								S	S	S	S	S		T	T	S																				S											T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	.	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K
Query Conservation																																	.
Alig confidence					.																												.																																				.
Template Conservation					.																																																																.
Template Sequence		I	Y	S	.	T	K	D	G	S	K	K	S	I	F	T	N	S	V	V	L	A	A	G	R	R	P	V	I	P	E	G	A	R	E	I	G	L	S	I	S	K	T	G	I	V	V	D	E	T	M	K	T	N	I	P	N	V	F	A	T	G	D	A	N	G	L	A	.	P	Y	Y	H	A	A	V	R	M	S	I	A
Template Known Secondary structure					.		S	S	S								S														T	T	T	T	T	T	T			B		S	S	S	B				T	T		B		S	S	T	T					G	G	G	T		S	S	.		S
Template Predicted Secondary structure					.																																																																.
Template SS confidence
		246	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.
		507	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	S	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	N	N	I	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions