Job Description P35340 Confidence 96.49% Date Wed Jan 25 15:20:51 GMT 2012 Rank 431 Aligned Residues 82 % Identity 26% Template c3ghaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced) Resolution 1.40 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	D	F	E	F	E	T	Y	Y	S	L	S	C	H	N	C	.	.	.	.	P	D	V	V	Q	A	L	N	L	M	S	V	L	N	P	R	I	K	H	T	A	I	D	G	G	T	F	Q	N	E	I	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	P	V	T	V	V	E	F	G	D	Y	K	C	P	S	C	K	V	F	N	S	D	I	F	P	K	I	Q	K	D	F	I	D	K	G	D	V	K	F	S	F	V	N	V	M	F	H	G	K	G	S	R	L	A	A	L	A	S	E	E	V	W	K	E	D	P	D	S	F	W	D	F	H	E	K	L	F	E	K
Template Known Secondary structure		T		S									T	T											T								T	T	T	T	T	S											S																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
																																																					166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	V	M	G	V	P	A	V	F	V	N	G	K	E	F	G	Q	G	R	M	T	L	T	E	I	V	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																				.
Template Sequence		Q	P	D	T	E	Q	E	W	V	T	P	G	L	L	G	D	L	A	K	S	T	T	K	I	K	P	E	T	L	K	E	N	L	D	K	E	T	F	A	S	Q	V	E	K	D	S	D	L	N	Q	K	M	N	I	Q	A	T	P	T	I	Y	V	N	D	K	V	.	I	K	N	F	A	D	Y	D	E	I	K	E	T
Template Known Secondary structure				S	S	S	S																S	S	S												T	T	T														T	T			S	S						T	T			.		S		T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.
		195	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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