Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 10 Aligned Residues 301 % Identity 37% Template c3ctyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I	D	S	Q
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		E	R	D	F	D	V	V	I	V	G	A	G	A	A	G	F	S	A	A	V	Y	A	A	R	S	G	F	S	V	A	I	L	D	K	A	V	A	G	G	L	T	A	E	A	P	L	V	E	N	Y	L	G	F	K	S	I	V	G	S	E	L	A	K	L	F	A	D	H	A	A	N	Y	A	K	I	R	E	G	V	E
Template Known Secondary structure													S													T	T								S	S	S	T	T	G	G	G	G	G		S		B			B	T	T	B	S	S	B															T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		V	R	S	I	K	K	T	.	.	.	.	.	Q	G	G	F	D	I	E	T	N	D	D	T	Y	H	A	K	Y	V	I	I	T	T	G	T	T	H	K	H	L	G	V	K	G	E	S	E	Y	F	G	K	G	T	S	Y	C	S	T	C	D	G	Y	L	F	K	G	K	R	V	V	T	I	G	G	G	N	S	G	A
Template Known Secondary structure									.	.	.	.	.	T	T							S	S	S																					B	T	T	T	T	T	B	T	T	T			S						G	G	G	G	B	T	S								S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		I	A	A	I	S	M	S	E	Y	V	K	N	V	T	I	I	E	Y	M	P	K	Y	M	C	E	N	A	Y	V	Q	E	I	K	K	R	.	N	I	P	Y	I	M	N	A	Q	V	T	E	I	V	G	D	G	K	K	V	T	G	V	K	Y	K	D	R	T	T	G	E	E	K	L	I	E	T	D	G	V	F	I	Y
Template Known Secondary structure								T	T	T	B	S							S	S	S	S			S											T	.	T						S									S	S	S	S									T	T	T									S
Template Predicted Secondary structure																																					.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	G	L	L	P	N	T	N	W	L	.	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L	I
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		V	G	L	I	P	Q	T	S	F	L	K	D	S	G	V	K	L	D	E	R	G	Y	I	V	V	D	S	R	Q	R	T	S	V	P	G	V	Y	A	A	G	D	V	T	S	G	N	F	A	Q	I	A	S	A	V	G	D	G	C	K	A	A	L	S	L	Y	S	D	S	I
Template Known Secondary structure									G	G	G	T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	T	T																								T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions