Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 18 Aligned Residues 305 % Identity 25% Template c2zbwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase-like protein from thermus2 thermophilus hb8 Resolution 2.10 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																				.	.											.	.	.
Query SS confidence																																				.	.											.	.	.
Query Sequence		D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	.	F	G	G	Q	I	L	D	T	V	D	.	.	.	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I
Query Conservation																																				.	.											.	.	.
Alig confidence																																				.	.											.	.	.
Template Conservation
Template Sequence		D	H	T	D	V	L	I	V	G	A	G	P	T	G	L	F	A	G	F	Y	V	G	X	R	G	L	S	F	R	F	V	D	P	L	P	E	P	G	G	Q	L	T	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	V	Y	A	K	D	L	V	K	G	L	V	E	Q	V	A	P	F	N	P	V	Y	S
Template Known Secondary structure												S													T	T								S	S	S	S	S							T		T	T	S					S	T	T		S	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	.	.	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G
Query Conservation																																																				.	.
Alig confidence												.	.	.																																						.	.
Template Conservation												.	.	.
Template Sequence		L	G	E	R	A	E	T	L	E	R	.	.	.	E	G	D	L	F	K	V	T	T	S	Q	G	N	A	Y	T	A	K	A	V	I	I	A	A	G	V	G	A	F	E	P	R	R	I	G	A	P	G	E	R	E	F	E	G	R	G	V	Y	Y	A	V	K	S	K	A	E	F	Q	G	K	R	V	L	I	V	G	G
Template Known Secondary structure			S									.	.	.		T	T							T	T	S													T	T	S										T	T	T	T	T	T	B	T	T	T			S	S		S		G	G	G	G	T	T								S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	.	.	.	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I
Query Conservation																																.	.	.
Alig confidence																																.	.	.																												.
Template Conservation																																																														.
Template Sequence		G	D	S	A	V	D	W	A	L	N	L	L	D	T	A	R	R	I	T	L	I	H	R	R	P	Q	F	R	A	H	E	A	S	V	K	E	L	X	K	A	H	E	E	G	R	L	E	V	L	T	P	Y	E	L	R	R	V	E	G	D	.	E	R	V	R	W	A	V	V	F	H	N	Q	T	Q	E	E	L	A	L
Template Known Secondary structure		S										T	T	T	T	S	S							S	S	S	S			S														T	T	S	S				T	T									S	.	S	S									T	T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	.	.	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L	I	R	T
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		E	V	D	A	V	L	I	L	A	G	Y	I	T	K	L	G	P	L	A	N	W	G	L	A	L	E	K	N	K	I	K	V	D	T	T	X	A	T	S	I	P	G	V	Y	A	C	G	D	I	V	T	Y	P	G	K	L	P	L	I	V	L	G	F	G	E	A	A	I	A	A	N	H	A	A	A	Y	A	N	P	A
Template Known Secondary structure				S													G	G	G	G	G	S						T	T						T	T		B		S	S	T	T					S	T	T				T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		519
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions